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2008


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New Frontiers in Characterizing Structure and Dynamics by NMR

Nilges, M., Markwick, P., Malliavin, TE., Rieping, W., Habeck, M.

In Computational Structural Biology: Methods and Applications, pages: 655-680, (Editors: Schwede, T. , M. C. Peitsch), World Scientific, New Jersey, NJ, USA, May 2008 (inbook)

Abstract
Nuclear Magnetic Resonance (NMR) spectroscopy has emerged as the method of choice for studying both the structure and the dynamics of biological macromolecule in solution. Despite the maturity of the NMR method for structure determination, its application faces a number of challenges. The method is limited to systems of relatively small molecular mass, data collection times are long, data analysis remains a lengthy procedure, and it is difficult to evaluate the quality of the final structures. The last years have seen significant advances in experimental techniques to overcome or reduce some limitations. The function of bio-macromolecules is determined by both their 3D structure and conformational dynamics. These molecules are inherently flexible systems displaying a broad range of dynamics on time–scales from picoseconds to seconds. NMR is unique in its ability to obtain dynamic information on an atomic scale. The experimental information on structure and dynamics is intricately mixed. It is however difficult to unite both structural and dynamical information into one consistent model, and protocols for the determination of structure and dynamics are performed independently. This chapter deals with the challenges posed by the interpretation of NMR data on structure and dynamics. We will first relate the standard structure calculation methods to Bayesian probability theory. We will then briefly describe the advantages of a fully Bayesian treatment of structure calculation. Then, we will illustrate the advantages of using Bayesian reasoning at least partly in standard structure calculations. The final part will be devoted to interpretation of experimental data on dynamics.

ei

Web [BibTex]

2008


Web [BibTex]


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Graph Mining with Variational Dirichlet Process Mixture Models

Tsuda, K., Kurihara, K.

In SDM 2008, pages: 432-442, (Editors: Zaki, M. J.), Society for Industrial and Applied Mathematics, Philadelphia, PA, USA, 8th SIAM International Conference on Data Mining, April 2008 (inproceedings)

Abstract
Graph data such as chemical compounds and XML documents are getting more common in many application domains. A main difficulty of graph data processing lies in the intrinsic high dimensionality of graphs, namely, when a graph is represented as a binary feature vector of indicators of all possible subgraph patterns, the dimensionality gets too large for usual statistical methods. We propose a nonparametric Bayesian method for clustering graphs and selecting salient patterns at the same time. Variational inference is adopted here, because sampling is not applicable due to extremely high dimensionality. The feature set minimizing the free energy is efficiently collected with the DFS code tree, where the generation of useless subgraphs is suppressed by a tree pruning condition. In experiments, our method is compared with a simpler approach based on frequent subgraph mining, and graph kernels.

ei

PDF Web [BibTex]

PDF Web [BibTex]


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Model-Based Reinforcement Learning with Continuous States and Actions

Deisenroth, M., Rasmussen, C., Peters, J.

In ESANN 2008, pages: 19-24, (Editors: Verleysen, M. ), d-side, Evere, Belgium, European Symposium on Artificial Neural Networks, April 2008 (inproceedings)

Abstract
Finding an optimal policy in a reinforcement learning (RL) framework with continuous state and action spaces is challenging. Approximate solutions are often inevitable. GPDP is an approximate dynamic programming algorithm based on Gaussian process (GP) models for the value functions. In this paper, we extend GPDP to the case of unknown transition dynamics. After building a GP model for the transition dynamics, we apply GPDP to this model and determine a continuous-valued policy in the entire state space. We apply the resulting controller to the underpowered pendulum swing up. Moreover, we compare our results on this RL task to a nearly optimal discrete DP solution in a fully known environment.

ei

PDF Web [BibTex]

PDF Web [BibTex]


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Learning Inverse Dynamics: A Comparison

Nguyen-Tuong, D., Peters, J., Seeger, M., Schölkopf, B.

In Advances in Computational Intelligence and Learning: Proceedings of the European Symposium on Artificial Neural Networks, pages: 13-18, (Editors: M Verleysen), d-side, Evere, Belgium, 16th European Symposium on Artificial Neural Networks (ESANN), April 2008 (inproceedings)

Abstract
While it is well-known that model can enhance the control performance in terms of precision or energy efficiency, the practical application has often been limited by the complexities of manually obtaining sufficiently accurate models. In the past, learning has proven a viable alternative to using a combination of rigid-body dynamics and handcrafted approximations of nonlinearities. However, a major open question is what nonparametric learning method is suited best for learning dynamics? Traditionally, locally weighted projection regression (LWPR), has been the standard method as it is capable of online, real-time learning for very complex robots. However, while LWPR has had significant impact on learning in robotics, alternative nonparametric regression methods such as support vector regression (SVR) and Gaussian processes regression (GPR) offer interesting alternatives with fewer open parameters and potentially higher accuracy. In this paper, we evaluate these three alternatives for model learning. Our comparison consists out of the evaluation of learning quality for each regression method using original data from SARCOS robot arm, as well as the robot tracking performance employing learned models. The results show that GPR and SVR achieve a superior learning precision and can be applied for real-time control obtaining higher accuracy. However, for the online learning LWPR presents the better method due to its lower computational requirements.

ei

PDF Web [BibTex]

PDF Web [BibTex]


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A Robot System for Biomimetic Navigation: From Snapshots to Metric Embeddings of View Graphs

Franz, MO., Stürzl, W., Reichardt, W., Mallot, HA.

In Robotics and Cognitive Approaches to Spatial Mapping, pages: 297-314, Springer Tracts in Advanced Robotics ; 38, (Editors: Jefferies, M.E. , W.-K. Yeap), Springer, Berlin, Germany, 2008 (inbook)

Abstract
Complex navigation behaviour (way-finding) involves recognizing several places and encoding a spatial relationship between them. Way-finding skills can be classified into a hierarchy according to the complexity of the tasks that can be performed [8]. The most basic form of way-finding is route navigation, followed by topological navigation where several routes are integrated into a graph-like representation. The highest level, survey navigation, is reached when this graph can be embedded into a common reference frame. In this chapter, we present the building blocks for a biomimetic robot navigation system that encompasses all levels of this hierarchy. As a local navigation method, we use scene-based homing. In this scheme, a goal location is characterized either by a panoramic snapshot of the light intensities as seen from the place, or by a record of the distances to the surrounding objects. The goal is found by moving in the direction that minimizes the discrepancy between the recorded intensities or distances and the current sensory input. For learning routes, the robot selects distinct views during exploration that are close enough to be reached by snapshot-based homing. When it encounters already visited places during route learning, it connects the routes and thus forms a topological representation of its environment termed a view graph. The final stage, survey navigation, is achieved by a graph embedding procedure which complements the topologic information of the view graph with odometric position estimates. Calculation of the graph embedding is done with a modified multidimensional scaling algorithm which makes use of distances and angles between nodes.

ei

PDF PDF DOI [BibTex]

PDF PDF DOI [BibTex]


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Simulation and analysis of a passive pitch reversal flapping wing mechanism for an aerial robotic platform

Arabagi, V., Sitti, M.

In Intelligent Robots and Systems, 2008. IROS 2008. IEEE/RSJ International Conference on, pages: 1260-1265, 2008 (inproceedings)

pi

Project Page [BibTex]

Project Page [BibTex]


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Human movement generation based on convergent flow fields: A computational model and a behavioral experiment

Hoffmann, H., Schaal, S.

In Advances in Computational Motor Control VII, Symposium at the Society for Neuroscience Meeting, Washington DC, 2008, 2008, clmc (inproceedings)

am

link (url) [BibTex]

link (url) [BibTex]


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Pattern generators with sensory feedback for the control of quadruped locomotion

Righetti, L., Ijspeert, A.

In 2008 IEEE International Conference on Robotics and Automation, pages: 819-824, IEEE, Pasadena, USA, 2008 (inproceedings)

Abstract
Central pattern generators (CPGs) are becoming a popular model for the control of locomotion of legged robots. Biological CPGs are neural networks responsible for the generation of rhythmic movements, especially locomotion. In robotics, a systematic way of designing such CPGs as artificial neural networks or systems of coupled oscillators with sensory feedback inclusion is still missing. In this contribution, we present a way of designing CPGs with coupled oscillators in which we can independently control the ascending and descending phases of the oscillations (i.e. the swing and stance phases of the limbs). Using insights from dynamical system theory, we construct generic networks of oscillators able to generate several gaits under simple parameter changes. Then we introduce a systematic way of adding sensory feedback from touch sensors in the CPG such that the controller is strongly coupled with the mechanical system it controls. Finally we control three different simulated robots (iCub, Aibo and Ghostdog) using the same controller to show the effectiveness of the approach. Our simulations prove the importance of independent control of swing and stance duration. The strong mutual coupling between the CPG and the robot allows for more robust locomotion, even under non precise parameters and non-flat environment.

mg

link (url) DOI [BibTex]

link (url) DOI [BibTex]


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Experimental Study of Limit Cycle and Chaotic Controllers for the Locomotion of Centipede Robots

Matthey, L., Righetti, L., Ijspeert, A.

In 2008 IEEE/RSJ International Conference on Intelligent Robots and Systems, pages: 1860-1865, IEEE, Nice, France, sep 2008 (inproceedings)

Abstract
In this contribution we present a CPG (central pattern generator) controller based on coupled Rossler systems. It is able to generate both limit cycle and chaotic behaviors through bifurcation. We develop an experimental test bench to measure quantitatively the performance of different controllers on unknown terrains of increasing difficulty. First, we show that for flat terrains, open loop limit cycle systems are the most efficient (in terms of speed of locomotion) but that they are quite sensitive to environmental changes. Second, we show that sensory feedback is a crucial addition for unknown terrains. Third, we show that the chaotic controller with sensory feedback outperforms the other controllers in very difficult terrains and actually promotes the emergence of short synchronized movement patterns. All that is done using an unified framework for the generation of limit cycle and chaotic behaviors, where a simple parameter change can switch from one behavior to the other through bifurcation. Such flexibility would allow the automatic adaptation of the robot locomotion strategy to the terrain uncertainty.

mg

link (url) DOI [BibTex]

link (url) DOI [BibTex]


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Fabrication and Characterization of Biologically Inspired Mushroom-Shaped Elastomer Microfiber Arrays

Kim, S., Sitti, M.

In ASME 2008 International Design Engineering Technical Conferences and Computers and Information in Engineering Conference, pages: 839-847, 2008 (inproceedings)

pi

Project Page [BibTex]

Project Page [BibTex]


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Gecko inspired micro-fibrillar adhesives for wall climbing robots on micro/nanoscale rough surfaces

Aksak, B., Murphy, M. P., Sitti, M.

In Robotics and Automation, 2008. ICRA 2008. IEEE International Conference on, pages: 3058-3063, 2008 (inproceedings)

pi

Project Page [BibTex]

Project Page [BibTex]


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Miniature Mobile Robots Down to Micron Scale

Sitti, M.

In Micro-NanoMechatronics and Human Science, 2008. MHS 2008. International Symposium on, pages: 525-525, 2008 (inproceedings)

pi

[BibTex]

[BibTex]


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Movement reproduction and obstacle avoidance with dynamic movement primitives and potential fields

Park, D., Hoffmann, H., Pastor, P., Schaal, S.

In IEEE International Conference on Humanoid Robots, 2008., 2008, clmc (inproceedings)

am

PDF [BibTex]

PDF [BibTex]


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Wetting and premelting of triple junctions and grain boundaries in the Al-Zn alloys

Straumal, B., Kogtenkova, O., Protasova, S., Mazilkin, A., Zieba, P., Czeppe, T., Wojewoda-Budka, J., Faryna, M.

In 495, pages: 126-131, Alicante, Spain, 2008 (inproceedings)

mms

DOI [BibTex]

DOI [BibTex]


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Hydrogen adsorption (Carbon, Zeolites, Nanocubes)

Hirscher, M., Panella, B.

In Hydrogen as a Future Energy Carrier, pages: 173-188, Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim, 2008 (incollection)

mms

[BibTex]

[BibTex]


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The dual role of uncertainty in force field learning

Mistry, M., Theodorou, E., Hoffmann, H., Schaal, S.

In Abstracts of the Eighteenth Annual Meeting of Neural Control of Movement (NCM), Naples, Florida, April 29-May 4, 2008, clmc (inproceedings)

Abstract
Force field experiments have been a successful paradigm for studying the principles of planning, execution, and learning in human arm movements. Subjects have been shown to cope with the disturbances generated by force fields by learning internal models of the underlying dynamics to predict disturbance effects or by increasing arm impedance (via co-contraction) if a predictive approach becomes infeasible. Several studies have addressed the issue uncertainty in force field learning. Scheidt et al. demonstrated that subjects exposed to a viscous force field of fixed structure but varying strength (randomly changing from trial to trial), learn to adapt to the mean disturbance, regardless of the statistical distribution. Takahashi et al. additionally show a decrease in strength of after-effects after learning in the randomly varying environment. Thus they suggest that the nervous system adopts a dual strategy: learning an internal model of the mean of the random environment, while simultaneously increasing arm impedance to minimize the consequence of errors. In this study, we examine what role variance plays in the learning of uncertain force fields. We use a 7 degree-of-freedom exoskeleton robot as a manipulandum (Sarcos Master Arm, Sarcos, Inc.), and apply a 3D viscous force field of fixed structure and strength randomly selected from trial to trial. Additionally, in separate blocks of trials, we alter the variance of the randomly selected strength multiplier (while keeping a constant mean). In each block, after sufficient learning has occurred, we apply catch trials with no force field and measure the strength of after-effects. As expected in higher variance cases, results show increasingly smaller levels of after-effects as the variance is increased, thus implying subjects choose the robust strategy of increasing arm impedance to cope with higher levels of uncertainty. Interestingly, however, subjects show an increase in after-effect strength with a small amount of variance as compared to the deterministic (zero variance) case. This result implies that a small amount of variability aides in internal model formation, presumably a consequence of the additional amount of exploration conducted in the workspace of the task.

am

[BibTex]

[BibTex]


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Dynamic movement primitives for movement generation motivated by convergent force fields in frog

Hoffmann, H., Pastor, P., Schaal, S.

In Adaptive Motion of Animals and Machines (AMAM), 2008, clmc (inproceedings)

am

PDF [BibTex]

PDF [BibTex]


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Polymeric Micro/Nanofiber Manufacturing and Mechanical Characterization

Nain, A. S., Sitti, M., Amon, C.

In ASME 2008 International Mechanical Engineering Congress and Exposition, pages: 295-303, 2008 (inproceedings)

pi

[BibTex]

[BibTex]


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An untethered magnetically actuated micro-robot capable of motion on arbitrary surfaces

Floyd, S., Pawashe, C., Sitti, M.

In Robotics and Automation, 2008. ICRA 2008. IEEE International Conference on, pages: 419-424, 2008 (inproceedings)

pi

[BibTex]

[BibTex]


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Fabrication of bio-inspired elastomer nanofiber arrays with spatulate tips using notching effect

Kim, S., Sitti, M., Jang, J., Thomas, E. L.

In Nanotechnology, 2008. NANO’08. 8th IEEE Conference on, pages: 780-782, 2008 (inproceedings)

pi

[BibTex]

[BibTex]


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A motorized anchoring mechanism for a tethered capsule robot using fibrillar adhesives for interventions in the esophagus

Glass, P., Cheung, E., Wang, H., Appasamy, R., Sitti, M.

In Biomedical Robotics and Biomechatronics, 2008. BioRob 2008. 2nd IEEE RAS & EMBS International Conference on, pages: 758-764, 2008 (inproceedings)

pi

[BibTex]

[BibTex]


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Emergence of Interaction Among Adaptive Agents

Martius, G., Nolfi, S., Herrmann, J. M.

In Proc. From Animals to Animats 10 (SAB 2008), 5040, pages: 457-466, LNCS, Springer, 2008 (inproceedings)

al

DOI [BibTex]

DOI [BibTex]


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A Dynamical System for Online Learning of Periodic Movements of Unknown Waveform and Frequency

Gams, A., Righetti, L., Ijspeert, A., Lenarčič, J.

In 2008 2nd IEEE RAS & EMBS International Conference on Biomedical Robotics and Biomechatronics, pages: 85-90, IEEE, Scottsdale, USA, October 2008 (inproceedings)

Abstract
The paper presents a two-layered system for learning and encoding a periodic signal onto a limit cycle without any knowledge on the waveform and the frequency of the signal, and without any signal processing. The first dynamical system is responsible for extracting the main frequency of the input signal. It is based on adaptive frequency phase oscillators in a feedback structure, enabling us to extract separate frequency components without any signal processing, as all of the processing is embedded in the dynamics of the system itself. The second dynamical system is responsible for learning of the waveform. It has a built-in learning algorithm based on locally weighted regression, which adjusts the weights according to the amplitude of the input signal. By combining the output of the first system with the input of the second system we can rapidly teach new trajectories to robots. The systems works online for any periodic signal and can be applied in parallel to multiple dimensions. Furthermore, it can adapt to changes in frequency and shape, e.g. to non-stationary signals, and is computationally inexpensive. Results using simulated and hand-generated input signals, along with applying the algorithm to a HOAP-2 humanoid robot are presented.

mg

link (url) DOI [BibTex]

link (url) DOI [BibTex]


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Passive compliant quadruped robot using central pattern generators for locomotion control

Rutishauser, S., Sproewitz, A., Righetti, L., Ijspeert, A.

In 2008 IEEE International Conference on Biomedical Robotics and Biomechatronics, pages: 710-715, IEEE, Scottsdale, USA, October 2008 (inproceedings)

Abstract
We present a new quadruped robot, ldquoCheetahrdquo, featuring three-segment pantographic legs with passive compliant knee joints. Each leg has two degrees of freedom - knee and hip joint can be actuated using proximal mounted RC servo motors, force transmission to the knee is achieved by means of a bowden cable mechanism. Simple electronics to command the actuators from a desktop computer have been designed in order to test the robot. A Central Pattern Generator (CPG) network has been implemented to generate different gaits. A parameter space search was performed and tested on the robot to optimize forward velocity.

mg

link (url) DOI [BibTex]

link (url) DOI [BibTex]


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Behavioral experiments on reinforcement learning in human motor control

Hoffmann, H., Theodorou, E., Schaal, S.

In Abstracts of the Eighteenth Annual Meeting of Neural Control of Movement (NCM), Naples, Florida, April 29-May 4, 2008, clmc (inproceedings)

Abstract
Reinforcement learning (RL) - learning solely based on reward or cost feedback - is widespread in robotics control and has been also suggested as computational model for human motor control. In human motor control, however, hardly any experiment studied reinforcement learning. Here, we study learning based on visual cost feedback in a reaching task and did three experiments: (1) to establish a simple enough experiment for RL, (2) to study spatial localization of RL, and (3) to study the dependence of RL on the cost function. In experiment (1), subjects sit in front of a drawing tablet and look at a screen onto which the drawing pen's position is projected. Beginning from a start point, their task is to move with the pen through a target point presented on screen. Visual feedback about the pen's position is given only before movement onset. At the end of a movement, subjects get visual feedback only about the cost of this trial. We choose as cost the squared distance between target and virtual pen position at the target line. Above a threshold value, the cost was fixed at this value. In the mapping of the pen's position onto the screen, we added a bias (unknown to subject) and Gaussian noise. As result, subjects could learn the bias, and thus, showed reinforcement learning. In experiment (2), we randomly altered the target position between three different locations (three different directions from start point: -45, 0, 45). For each direction, we chose a different bias. As result, subjects learned all three bias values simultaneously. Thus, RL can be spatially localized. In experiment (3), we varied the sensitivity of the cost function by multiplying the squared distance with a constant value C, while keeping the same cut-off threshold. As in experiment (2), we had three target locations. We assigned to each location a different C value (this assignment was randomized between subjects). Since subjects learned the three locations simultaneously, we could directly compare the effect of the different cost functions. As result, we found an optimal C value; if C was too small (insensitive cost), learning was slow; if C was too large (narrow cost valley), the exploration time was longer and learning delayed. Thus, reinforcement learning in human motor control appears to be sen

am

[BibTex]

[BibTex]


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Movement generation by learning from demonstration and generalization to new targets

Pastor, P., Hoffmann, H., Schaal, S.

In Adaptive Motion of Animals and Machines (AMAM), 2008, clmc (inproceedings)

am

PDF [BibTex]

PDF [BibTex]


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Combining dynamic movement primitives and potential fields for online obstacle avoidance

Park, D., Hoffmann, H., Schaal, S.

In Adaptive Motion of Animals and Machines (AMAM), Cleveland, Ohio, 2008, 2008, clmc (inproceedings)

am

link (url) [BibTex]

link (url) [BibTex]


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Fabrication of Single and Multi-Layer Fibrous Biomaterial Scaffolds for Tissue Engineering

Nain, A. S., Miller, E., Sitti, M., Campbell, P., Amon, C.

In ASME 2008 International Mechanical Engineering Congress and Exposition, pages: 231-238, 2008 (inproceedings)

pi

[BibTex]

[BibTex]


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Performance of different foot designs for a water running robot

Floyd, S., Adilak, S., Ramirez, S., Rogman, R., Sitti, M.

In Robotics and Automation, 2008. ICRA 2008. IEEE International Conference on, pages: 244-250, 2008 (inproceedings)

pi

[BibTex]

[BibTex]


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Dynamic modeling of a basilisk lizard inspired quadruped robot running on water

Park, H. S., Floyd, S., Sitti, M.

In Intelligent Robots and Systems, 2008. IROS 2008. IEEE/RSJ International Conference on, pages: 3101-3107, 2008 (inproceedings)

pi

[BibTex]

[BibTex]


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Bacterial propulsion of chemically patterned micro-cylinders

Behkam, B., Sitti, M.

In Biomedical Robotics and Biomechatronics, 2008. BioRob 2008. 2nd IEEE RAS & EMBS International Conference on, pages: 753-757, 2008 (inproceedings)

pi

[BibTex]

[BibTex]


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Structure from Behavior in Autonomous Agents

Martius, G., Fiedler, K., Herrmann, J.

In Proc. IEEE Intl. Conf. Intelligent Robots and Systems (IROS 2008), pages: 858 - 862, 2008 (inproceedings)

al

DOI [BibTex]

DOI [BibTex]


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Ma\ssgeschneiderte Speichermaterialien

Hirscher, M.

In Von Brennstoffzellen bis Leuchtdioden (Energie und Chemie - Ein Bündnis für die Zukunft), pages: 31-33, Deutsche Bunsen-Gesellschaft für Physikalische Chemie e.V., Frankfurt am Main, 2008 (incollection)

mms

[BibTex]

[BibTex]


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Computational model for movement learning under uncertain cost

Theodorou, E., Hoffmann, H., Mistry, M., Schaal, S.

In Abstracts of the Society of Neuroscience Meeting (SFN 2008), Washington, DC 2008, 2008, clmc (inproceedings)

Abstract
Stochastic optimal control is a framework for computing control commands that lead to an optimal behavior under a given cost. Despite the long history of optimal control in engineering, it has been only recently applied to describe human motion. So far, stochastic optimal control has been mainly used in tasks that are already learned, such as reaching to a target. For learning, however, there are only few cases where optimal control has been applied. The main assumptions of stochastic optimal control that restrict its application to tasks after learning are the a priori knowledge of (1) a quadratic cost function (2) a state space model that captures the kinematics and/or dynamics of musculoskeletal system and (3) a measurement equation that models the proprioceptive and/or exteroceptive feedback. Under these assumptions, a sequence of control gains is computed that is optimal with respect to the prespecified cost function. In our work, we relax the assumption of the a priori known cost function and provide a computational framework for modeling tasks that involve learning. Typically, a cost function consists of two parts: one part that models the task constraints, like squared distance to goal at movement endpoint, and one part that integrates over the squared control commands. In learning a task, the first part of this cost function will be adapted. We use an expectation-maximization scheme for learning: the expectation step optimizes the task constraints through gradient descent of a reward function and the maximizing step optimizes the control commands. Our computational model is tested and compared with data given from a behavioral experiment. In this experiment, subjects sit in front of a drawing tablet and look at a screen onto which the drawing-pen's position is projected. Beginning from a start point, their task is to move with the pen through a target point presented on screen. Visual feedback about the pen's position is given only before movement onset. At the end of a movement, subjects get visual feedback only about the cost of this trial. In the mapping of the pen's position onto the screen, we added a bias (unknown to subject) and Gaussian noise. Therefore the cost is a function of this bias. The subjects were asked to reach to the target and minimize this cost over trials. In this behavioral experiment, subjects could learn the bias and thus showed reinforcement learning. With our computational model, we could model the learning process over trials. Particularly, the dependence on parameters of the reward function (Gaussian width) and the modulation of movement variance over time were similar in experiment and model.

am

[BibTex]

[BibTex]


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A Bayesian approach to empirical local linearizations for robotics

Ting, J., D’Souza, A., Vijayakumar, S., Schaal, S.

In International Conference on Robotics and Automation (ICRA2008), Pasadena, CA, USA, May 19-23, 2008, 2008, clmc (inproceedings)

Abstract
Local linearizations are ubiquitous in the control of robotic systems. Analytical methods, if available, can be used to obtain the linearization, but in complex robotics systems where the the dynamics and kinematics are often not faithfully obtainable, empirical linearization may be preferable. In this case, it is important to only use data for the local linearization that lies within a ``reasonable'' linear regime of the system, which can be defined from the Hessian at the point of the linearization -- a quantity that is not available without an analytical model. We introduce a Bayesian approach to solve statistically what constitutes a ``reasonable'' local regime. We approach this problem in the context local linear regression. In contrast to previous locally linear methods, we avoid cross-validation or complex statistical hypothesis testing techniques to find the appropriate local regime. Instead, we treat the parameters of the local regime probabilistically and use approximate Bayesian inference for their estimation. This approach results in an analytical set of iterative update equations that are easily implemented on real robotics systems for real-time applications. As in other locally weighted regressions, our algorithm also lends itself to complete nonlinear function approximation for learning empirical internal models. We sketch the derivation of our Bayesian method and provide evaluations on synthetic data and actual robot data where the analytical linearization was known.

am

link (url) [BibTex]

link (url) [BibTex]


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Do humans plan continuous trajectories in kinematic coordinates?

Hoffmann, H., Schaal, S.

In Abstracts of the Society of Neuroscience Meeting (SFN 2008), Washington, DC 2008, 2008, clmc (inproceedings)

Abstract
The planning and execution of human arm movements is still unresolved. An ongoing controversy is whether we plan a movement in kinematic coordinates and convert these coordinates with an inverse internal model into motor commands (like muscle activation) or whether we combine a few muscle synergies or equilibrium points to move a hand, e.g., between two targets. The first hypothesis implies that a planner produces a desired end-effector position for all time points; the second relies on the dynamics of the muscular-skeletal system for a given control command to produce a continuous end-effector trajectory. To distinguish between these two possibilities, we use a visuomotor adaptation experiment. Subjects moved a pen on a graphics tablet and observed the pen's mapped position onto a screen (subjects quickly adapted to this mapping). The task was to move a cursor between two points in a given time window. In the adaptation test, we manipulated the velocity profile of the cursor feedback such that the shape of the trajectories remained unchanged (for straight paths). If humans would use a kinematic plan and map at each time the desired end-effector position onto control commands, subjects should adapt to the above manipulation. In a similar experiment, Wolpert et al (1995) showed adaptation to changes in the curvature of trajectories. This result, however, cannot rule out a shift of an equilibrium point or an additional synergy activation between start and end point of a movement. In our experiment, subjects did two sessions, one control without and one with velocity-profile manipulation. To skew the velocity profile of the cursor trajectory, we added to the current velocity, v, the function 0.8*v*cos(pi + pi*x), where x is the projection of the cursor position onto the start-goal line divided by the distance start to goal (x=0 at the start point). As result, subjects did not adapt to this manipulation: for all subjects, the true hand motion was not significantly modified in a direction consistent with adaptation, despite that the visually presented motion differed significantly from the control motion. One may still argue that this difference in motion was insufficient to be processed visually. Thus, as a control experiment, we replayed control and modified motions to the subjects and asked which of the two motions appeared 'more natural'. Subjects chose the unperturbed motion as more natural significantly better than chance. In summary, for a visuomotor transformation task, the hypothesis of a planned continuous end-effector trajectory predicts adaptation to a modified velocity profile. The current experiment found no adaptation under such transformation.

am

[BibTex]

[BibTex]


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Design and Numerical Modeling of an On-Board Chemical Release Module for Motion Control of Bacteria-Propelled Swimming Micro-Robots

Behkam, B., Nain, A. S., Amon, C. H., Sitti, M.

In ASME 2008 International Mechanical Engineering Congress and Exposition, pages: 239-244, 2008 (inproceedings)

pi

[BibTex]

[BibTex]


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Investigation of Calcium Mechanotransduction by Quasi 3-D Microfiber Mechanical Stimulation of Cells

Ruder, W. C., Pratt, E. D., Sitti, M., LeDuc, P. R., Antaki, J. F.

In ASME 2008 Summer Bioengineering Conference, pages: 1049-1050, 2008 (inproceedings)

pi

[BibTex]

[BibTex]


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Beanbag robotics: Robotic swarms with 1-dof units

Kriesel, D. M., Cheung, E., Sitti, M., Lipson, H.

In International Conference on Ant Colony Optimization and Swarm Intelligence, pages: 267-274, 2008 (inproceedings)

pi

[BibTex]

[BibTex]


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Particle image velocimetry and thrust of flagellar micro propulsion systems

Danis, U., Sitti, M., Pekkan, K.

In APS Division of Fluid Dynamics Meeting Abstracts, 1, 2008 (inproceedings)

pi

[BibTex]

[BibTex]


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A modular bio-inspired architecture for movement generation for the infant-like robot iCub

Degallier, S., Righetti, L., Natale, L., Nori, F., Metta, G., Ijspeert, A.

In 2008 2nd IEEE RAS & EMBS International Conference on Biomedical Robotics and Biomechatronics, pages: 795-800, IEEE, Scottsdale, USA, October 2008 (inproceedings)

Abstract
Movement generation in humans appears to be processed through a three-layered architecture, where each layer corresponds to a different level of abstraction in the representation of the movement. In this article, we will present an architecture reflecting this organization and based on a modular approach to human movement generation. We will show that our architecture is well suited for the online generation and modulation of motor behaviors, but also for switching between motor behaviors. This will be illustrated respectively through an interactive drumming task and through switching between reaching and crawling.

mg

link (url) DOI [BibTex]

link (url) DOI [BibTex]


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Study of the intermixing of Fe\textendashPt multilayers by analytical and high-resolution transmission electron microscopy

Sigle, W., Kaiser, T., Goll, D., Goo, N. H., Srot, V., van Aken, P. A., Detemple, E., Jäger, W.

In EMC2008, 14th European Microscopy Congress, Vol. 2: Materials Science, pages: 109-110, Springer, Aachen, Germany, 2008 (inproceedings)

mms

DOI [BibTex]

DOI [BibTex]

2005


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Kernel ICA for Large Scale Problems

Jegelka, S., Gretton, A., Achlioptas, D.

In pages: -, NIPS Workshop on Large Scale Kernel Machines, December 2005 (inproceedings)

ei

Web [BibTex]

2005


Web [BibTex]


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Training Support Vector Machines with Multiple Equality Constraints

Kienzle, W., Schölkopf, B.

In Proceedings of the 16th European Conference on Machine Learning, Lecture Notes in Computer Science, Vol. 3720, pages: 182-193, (Editors: JG Carbonell and J Siekmann), Springer, Berlin, Germany, ECML, November 2005 (inproceedings)

Abstract
In this paper we present a primal-dual decomposition algorithm for support vector machine training. As with existing methods that use very small working sets (such as Sequential Minimal Optimization (SMO), Successive Over-Relaxation (SOR) or the Kernel Adatron (KA)), our method scales well, is straightforward to implement, and does not require an external QP solver. Unlike SMO, SOR and KA, the method is applicable to a large number of SVM formulations regardless of the number of equality constraints involved. The effectiveness of our algorithm is demonstrated on a more difficult SVM variant in this respect, namely semi-parametric support vector regression.

ei

PDF DOI [BibTex]

PDF DOI [BibTex]


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Measuring Statistical Dependence with Hilbert-Schmidt Norms

Gretton, A., Bousquet, O., Smola, A., Schoelkopf, B.

In Algorithmic Learning Theory, Lecture Notes in Computer Science, Vol. 3734, pages: 63-78, (Editors: S Jain and H-U Simon and E Tomita), Springer, Berlin, Germany, 16th International Conference ALT, October 2005 (inproceedings)

Abstract
We propose an independence criterion based on the eigenspectrum of covariance operators in reproducing kernel Hilbert spaces (RKHSs), consisting of an empirical estimate of the Hilbert-Schmidt norm of the cross-covariance operator (we term this a Hilbert-Schmidt Independence Criterion, or HSIC). This approach has several advantages, compared with previous kernel-based independence criteria. First, the empirical estimate is simpler than any other kernel dependence test, and requires no user-defined regularisation. Second, there is a clearly defined population quantity which the empirical estimate approaches in the large sample limit, with exponential convergence guaranteed between the two: this ensures that independence tests based on {methodname} do not suffer from slow learning rates. Finally, we show in the context of independent component analysis (ICA) that the performance of HSIC is competitive with that of previously published kernel-based criteria, and of other recently published ICA methods.

ei

PDF DOI [BibTex]

PDF DOI [BibTex]


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An Analysis of the Anti-Learning Phenomenon for the Class Symmetric Polyhedron

Kowalczyk, A., Chapelle, O.

In Algorithmic Learning Theory: 16th International Conference, pages: 78-92, Algorithmic Learning Theory, October 2005 (inproceedings)

Abstract
This paper deals with an unusual phenomenon where most machine learning algorithms yield good performance on the training set but systematically worse than random performance on the test set. This has been observed so far for some natural data sets and demonstrated for some synthetic data sets when the classification rule is learned from a small set of training samples drawn from some high dimensional space. The initial analysis presented in this paper shows that anti-learning is a property of data sets and is quite distinct from overfitting of a training data. Moreover, the analysis leads to a specification of some machine learning procedures which can overcome anti-learning and generate ma- chines able to classify training and test data consistently.

ei

PDF [BibTex]

PDF [BibTex]


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Building Sparse Large Margin Classifiers

Wu, M., Schölkopf, B., BakIr, G.

In Proceedings of the 22nd International Conference on Machine Learning, pages: 996-1003, (Editors: L De Raedt and S Wrobel ), ACM, New York, NY, USA, ICML , August 2005 (inproceedings)

Abstract
This paper presents an approach to build Sparse Large Margin Classifiers (SLMC) by adding one more constraint to the standard Support Vector Machine (SVM) training problem. The added constraint explicitly controls the sparseness of the classifier and an approach is provided to solve the formulated problem. When considering the dual of this problem, it can be seen that building an SLMC is equivalent to constructing an SVM with a modified kernel function. Further analysis of this kernel function indicates that the proposed approach essentially finds a discriminating subspace that can be spanned by a small number of vectors, and in this subspace different classes of data are linearly well separated. Experimental results over several classification benchmarks show that in most cases the proposed approach outperforms the state-of-art sparse learning algorithms.

ei

PDF DOI [BibTex]

PDF DOI [BibTex]


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Learning from Labeled and Unlabeled Data on a Directed Graph

Zhou, D., Huang, J., Schölkopf, B.

In Proceedings of the 22nd International Conference on Machine Learning, pages: 1041 -1048, (Editors: L De Raedt and S Wrobel), ACM, New York, NY, USA, ICML, August 2005 (inproceedings)

Abstract
We propose a general framework for learning from labeled and unlabeled data on a directed graph in which the structure of the graph including the directionality of the edges is considered. The time complexity of the algorithm derived from this framework is nearly linear due to recently developed numerical techniques. In the absence of labeled instances, this framework can be utilized as a spectral clustering method for directed graphs, which generalizes the spectral clustering approach for undirected graphs. We have applied our framework to real-world web classification problems and obtained encouraging results.

ei

PostScript PDF [BibTex]

PostScript PDF [BibTex]


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Regularization on Discrete Spaces

Zhou, D., Schölkopf, B.

In Pattern Recognition, Lecture Notes in Computer Science, Vol. 3663, pages: 361-368, (Editors: WG Kropatsch and R Sablatnig and A Hanbury), Springer, Berlin, Germany, 27th DAGM Symposium, August 2005 (inproceedings)

Abstract
We consider the classification problem on a finite set of objects. Some of them are labeled, and the task is to predict the labels of the remaining unlabeled ones. Such an estimation problem is generally referred to as transductive inference. It is well-known that many meaningful inductive or supervised methods can be derived from a regularization framework, which minimizes a loss function plus a regularization term. In the same spirit, we propose a general discrete regularization framework defined on finite object sets, which can be thought of as the discrete analogue of classical regularization theory. A family of transductive inference schemes is then systemically derived from the framework, including our earlier algorithm for transductive inference, with which we obtained encouraging results on many practical classification problems. The discrete regularization framework is built on the discrete analysis and geometry developed by ourselves, in which a number of discrete differential operators of various orders are constructed, which can be thought of as the discrete analogue of their counterparts in the continuous case.

ei

PDF PostScript DOI [BibTex]

PDF PostScript DOI [BibTex]


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Large Margin Non-Linear Embedding

Zien, A., Candela, J.

In ICML 2005, pages: 1065-1072, (Editors: De Raedt, L. , S. Wrobel), ACM Press, New York, NY, USA, 22nd International Conference on Machine Learning, August 2005 (inproceedings)

Abstract
It is common in classification methods to first place data in a vector space and then learn decision boundaries. We propose reversing that process: for fixed decision boundaries, we ``learn‘‘ the location of the data. This way we (i) do not need a metric (or even stronger structure) -- pairwise dissimilarities suffice; and additionally (ii) produce low-dimensional embeddings that can be analyzed visually. We achieve this by combining an entropy-based embedding method with an entropy-based version of semi-supervised logistic regression. We present results for clustering and semi-supervised classification.

ei

PDF PostScript Web DOI [BibTex]

PDF PostScript Web DOI [BibTex]