Header logo is


2000


no image
Knowledge Discovery in Databases: An Information Retrieval Perspective

Ong, CS.

Malaysian Journal of Computer Science, 13(2):54-63, December 2000 (article)

Abstract
The current trend of increasing capabilities in data generation and collection has resulted in an urgent need for data mining applications, also called knowledge discovery in databases. This paper identifies and examines the issues involved in extracting useful grains of knowledge from large amounts of data. It describes a framework to categorise data mining systems. The author also gives an overview of the issues pertaining to data pre processing, as well as various information gathering methodologies and techniques. The paper covers some popular tools such as classification, clustering, and generalisation. A summary of statistical and machine learning techniques used currently is also provided.

ei

PDF [BibTex]

2000


PDF [BibTex]


no image
A Simple Iterative Approach to Parameter Optimization

Zien, A., Zimmer, R., Lengauer, T.

Journal of Computational Biology, 7(3,4):483-501, November 2000 (article)

Abstract
Various bioinformatics problems require optimizing several different properties simultaneously. For example, in the protein threading problem, a scoring function combines the values for different parameters of possible sequence-to-structure alignments into a single score to allow for unambiguous optimization. In this context, an essential question is how each property should be weighted. As the native structures are known for some sequences, a partial ordering on optimal alignments to other structures, e.g., derived from structural comparisons, may be used to adjust the weights. To resolve the arising interdependence of weights and computed solutions, we propose a heuristic approach: iterating the computation of solutions (here, threading alignments) given the weights and the estimation of optimal weights of the scoring function given these solutions via systematic calibration methods. For our application (i.e., threading), this iterative approach results in structurally meaningful weights that significantly improve performance on both the training and the test data sets. In addition, the optimized parameters show significant improvements on the recognition rate for a grossly enlarged comprehensive benchmark, a modified recognition protocol as well as modified alignment types (local instead of global and profiles instead of single sequences). These results show the general validity of the optimized weights for the given threading program and the associated scoring contributions.

ei

Web [BibTex]

Web [BibTex]


no image
Identification of Drug Target Proteins

Zien, A., Küffner, R., Mevissen, T., Zimmer, R., Lengauer, T.

ERCIM News, 43, pages: 16-17, October 2000 (article)

ei

Web [BibTex]

Web [BibTex]


no image
Engineering Support Vector Machine Kernels That Recognize Translation Initiation Sites

Zien, A., Rätsch, G., Mika, S., Schölkopf, B., Lengauer, T., Müller, K.

Bioinformatics, 16(9):799-807, September 2000 (article)

Abstract
Motivation: In order to extract protein sequences from nucleotide sequences, it is an important step to recognize points at which regions start that code for proteins. These points are called translation initiation sites (TIS). Results: The task of finding TIS can be modeled as a classification problem. We demonstrate the applicability of support vector machines for this task, and show how to incorporate prior biological knowledge by engineering an appropriate kernel function. With the described techniques the recognition performance can be improved by 26% over leading existing approaches. We provide evidence that existing related methods (e.g. ESTScan) could profit from advanced TIS recognition.

ei

Web DOI [BibTex]

Web DOI [BibTex]


no image
A Meanfield Approach to the Thermodynamics of a Protein-Solvent System with Application to the Oligomerization of the Tumour Suppressor p53.

Noolandi, J., Davison, TS., Vokel, A., Nie, F., Kay, C., Arrowsmith, C.

Proceedings of the National Academy of Sciences of the United States of America, 97(18):9955-9960, August 2000 (article)

ei

Web [BibTex]

Web [BibTex]


Thumb xl ijcv2000teaser
Probabilistic detection and tracking of motion boundaries

Black, M. J., Fleet, D. J.

Int. J. of Computer Vision, 38(3):231-245, July 2000 (article)

Abstract
We propose a Bayesian framework for representing and recognizing local image motion in terms of two basic models: translational motion and motion boundaries. Motion boundaries are represented using a non-linear generative model that explicitly encodes the orientation of the boundary, the velocities on either side, the motion of the occluding edge over time, and the appearance/disappearance of pixels at the boundary. We represent the posterior probability distribution over the model parameters given the image data using discrete samples. This distribution is propagated over time using a particle filtering algorithm. To efficiently represent such a high-dimensional space we initialize samples using the responses of a low-level motion discontinuity detector. The formulation and computational model provide a general probabilistic framework for motion estimation with multiple, non-linear, models.

ps

pdf pdf from publisher Video [BibTex]

pdf pdf from publisher Video [BibTex]


no image
New Support Vector Algorithms

Schölkopf, B., Smola, A., Williamson, R., Bartlett, P.

Neural Computation, 12(5):1207-1245, May 2000 (article)

Abstract
We propose a new class of support vector algorithms for regression and classification. In these algorithms, a parameter {nu} lets one effectively control the number of support vectors. While this can be useful in its own right, the parameterization has the additional benefit of enabling us to eliminate one of the other free parameters of the algorithm: the accuracy parameter {epsilon} in the regression case, and the regularization constant C in the classification case. We describe the algorithms, give some theoretical results concerning the meaning and the choice of {nu}, and report experimental results.

ei

Web DOI [BibTex]

Web DOI [BibTex]


no image
Bounds on Error Expectation for Support Vector Machines

Vapnik, V., Chapelle, O.

Neural Computation, 12(9):2013-2036, 2000 (article)

Abstract
We introduce the concept of span of support vectors (SV) and show that the generalization ability of support vector machines (SVM) depends on this new geometrical concept. We prove that the value of the span is always smaller (and can be much smaller) than the diameter of the smallest sphere containing th e support vectors, used in previous bounds. We also demonstate experimentally that the prediction of the test error given by the span is very accurate and has direct application in model selection (choice of the optimal parameters of the SVM)

ei

GZIP [BibTex]

GZIP [BibTex]


Thumb xl toc image
Phenomenological damping in optical response tensors

Buckingham, A., Fischer, P.

PHYSICAL REVIEW A, 61(3), 2000 (article)

Abstract
Although perturbation theory applied to the optical response of a molecule or material system is only strictly valid far from resonances, it is often applied to ``near-resonance{''} conditions by means of complex energies incorporating damping. Inconsistent signs of the damping in optical response tensors have appeared in the recent literature, as have errors in the treatment of the perturbation by a static held. The ``equal-sign{''} convention used in a recent publication yields an unphysical material response, and Koroteev's intimation that linear electro-optical circular dichroism may exist in an optically active liquid under resonance conditions is also flawed. We show that the isotropic part of the Pockels tensor vanishes.

pf

DOI [BibTex]

DOI [BibTex]


Thumb xl toc image
Ab initio investigation of the sum-frequency hyperpolarizability of small chiral molecules

Champagne, B., Fischer, P., Buckingham, A.

CHEMICAL PHYSICS LETTERS, 331(1):83-88, 2000 (article)

Abstract
Using a sum-over-states procedure based on configuration interaction singles /6-311++G{*}{*}, we have computed the sum-frequency hyperpolarizability beta (ijk)(-3 omega; 2 omega, omega) Of two small chiral molecules, R-monofluoro-oxirane and R-(+)-propylene oxide. Excitation energies were scaled to fit experimental UV-absorption data and checked with ab initio values from time-dependent density functional theory. The isotropic part of the computed hyperpolarizabilities, beta(-3 omega; 2 omega, omega), is much smaller than that reported previously from sum-frequency generation experiments on aqueous solutions of arabinose. Comparison is made with a single-centre chiral model. (C) 2000 Elsevier Science B.V. All rights reserved.

pf

DOI [BibTex]

DOI [BibTex]


Thumb xl toc image
Three-wave mixing in chiral liquids

Fischer, P., Wiersma, D., Righini, R., Champagne, B., Buckingham, A.

PHYSICAL REVIEW LETTERS, 85(20):4253-4256, 2000 (article)

Abstract
Second-order nonlinear optical frequency conversion in isotropic systems is only dipole allowed for sum- and difference-frequency generation in chiral media. We develop a single-center chiral model of the three-wave mixing (sum:frequency generation) nonlinearity and estimate its magnitude. We also report results from ab initio calculations and from three- and four-wave mixing experiments in support of the theoretical estimates. We show that the second-order susceptibility in chiral liquids is much smaller than previously thought.

pf

DOI [BibTex]

DOI [BibTex]


no image
Two-dimensional fine particle positioning under an optical microscope using a piezoresistive cantilever as a manipulator

Sitti, M., Hashimoto, H.

journal of Micromechatronics, 1(1):25-48, Brill, 2000 (article)

pi

[BibTex]


no image
A brachiating robot controller

Nakanishi, J., Fukuda, T., Koditschek, D. E.

IEEE Transactions on Robotics and Automation, 16(2):109-123, 2000, clmc (article)

Abstract
We report on our empirical studies of a new controller for a two-link brachiating robot. Motivated by the pendulum-like motion of an apeâ??s brachiation, we encode this task as the output of a â??target dynamical system.â? Numerical simulations indicate that the resulting controller solves a number of brachiation problems that we term the â??ladder,â? â??swing-up,â? and â??ropeâ? problems. Preliminary analysis provides some explanation for this success. The proposed controller is implemented on a physical system in our laboratory. The robot achieves behaviors including â??swing locomotionâ? and â??swing upâ? and is capable of continuous locomotion over several rungs of a ladder. We discuss a number of formal questions whose answers will be required to gain a full understanding of the strengths and weaknesses of this approach.

am

link (url) [BibTex]

link (url) [BibTex]


no image
Anisotropic flux pinning in thin YBCO-films by substrate modifications

Leonhardt, S., Warthmann, R., Albrecht, J., Jooss, C., Kronmüller, H., Haage, T., Zegenhagen, J., Habermeier, H.-U.

{Physica C}, 332, pages: 214-218, 2000 (article)

mms

[BibTex]

[BibTex]


no image
A review of the magnetic relaxation and its application to the study of atomic defects in α-iron and its diuluted alloys

Blythe, H. J., Kronmüller, H., Seeger, A., Walz, F.

{Physica Status Solidi (A)}, 181, pages: 233-345, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Magnetic properties of Sm2Co17-xGax (x \textequals 0-7) compounds

Liang, B., Kleinschroth, I., Shen, B. G., Kronmüller, H.

{Journal of Applied Physics}, 87, pages: 5314-5316, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Computational micromagnetism of magnetic structures and magnetization processes in small particles

Kronmüller, H., Hertel, R.

{Journal of Magnetism and Magnetic Materials}, 215-216, pages: 11-17, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Interface-structure studies by atomic-resolution electron microscopy, order-disorder phenomena, and atomic diffusion in gas-phase-synthesized nanocrystalline solids

Schaefer, H.-E., Reimann, K., Straub, W., Phillipp, F., Tanimoto, H., Brossmann, U., Würschum, R.

{Materials Science and Engineering A}, 286, pages: 24-33, 2000 (article)

mms

[BibTex]

[BibTex]


no image
High-performance permanent magnets

Goll, D., Kronmüller, H.

{Naturwissenschaften}, 87, pages: 423-438, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Nonlinear magnetoelastic coupling coefficients from simultaneous measurements of magnetostrictive stress and anisotropy in epitaxial magnetic films

Fähnle, M., Komelj, M.

{Journal of Applied Physics}, 88, pages: 2781-2786, 2000 (article)

mms

[BibTex]


no image
Reconstruction of the Mo(100) surface: a tight-binding study

Haas, H., Wang, C. Z., Ho, K. M., Fähnle, M., Elsässer, C.

{Surface Science}, 457, pages: L397-L403, 2000 (article)

mms

[BibTex]

[BibTex]


no image
The strain-softening phenomenon of icosahedral Al-Pd-Mn single quasicrystals

Brunner, D., Plachke, D., Carstanjen, H. D.

{Materials Science and Engineering A}, 294-296, pages: 773-776, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Corrosion behaviour of the protective and decorative TiN coatings on large area steel strips

Vershinin, N., Filonov, K., Straumal, B., Gust, W., Wiener, I., Rabkin, E., Kazakevich, A.

{Surface and Coatings Technology}, 125, pages: 229-232, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Investigation of Virtual Reality Interface for AFM-based Nano Manipulation

Horiguchi, S., Sitti, M., Hashimoto, H.

IEEJ Transactions on Electronics, Information and Systems, 120(12):1948-1956, The Institute of Electrical Engineers of Japan, 2000 (article)

pi

[BibTex]

[BibTex]


no image
Interaction of rhythmic and discrete pattern generators in single joint movements

Sternad, D., Dean, W. J., Schaal, S.

Human Movement Science, 19(4):627-665, 2000, clmc (article)

Abstract
The study investigates a single-joint movement task that combines a translatory and cyclic component with the objective to investigate the interaction of discrete and rhythmic movement elements. Participants performed an elbow movement in the horizontal plane, oscillating at a prescribed frequency around one target and shifting to a second target upon a trigger signal, without stopping the oscillation. Analyses focused on extracting the mutual influences of the rhythmic and the discrete component of the task. Major findings are: (1) The onset of the discrete movement was confined to a limited phase window in the rhythmic cycle. (2) Its duration was influenced by the period of oscillation. (3) The rhythmic oscillation was "perturbed" by the discrete movement as indicated by phase resetting. On the basis of these results we propose a model for the coordination of discrete and rhythmic actions (K. Matsuoka, Sustained oscillations generated by mutually inhibiting neurons with adaptations, Biological Cybernetics 52 (1985) 367-376; Mechanisms of frequency and pattern control in the neural rhythm generators, Biological Cybernetics 56 (1987) 345-353). For rhythmic movements an oscillatory pattern generator is developed following models of half-center oscillations (D. Bullock, S. Grossberg, The VITE model: a neural command circuit for generating arm and articulated trajectories, in: J.A.S. Kelso, A.J. Mandel, M. F. Shlesinger (Eds.), Dynamic Patterns in Complex Systems. World Scientific. Singapore. 1988. pp. 305-326). For discrete movements a point attractor dynamics is developed close to the VITE model For each joint degree of freedom both pattern generators co-exist but exert mutual inhibition onto each other. The suggested modeling framework provides a unified account for both discrete and rhythmic movements on the basis of neuronal circuitry. Simulation results demonstrated that the effects observed in human performance can be replicated using the two pattern generators with a mutually inhibiting coupling.

am

link (url) [BibTex]

link (url) [BibTex]


no image
Influence of substrate irradiation on critical density and microstructure in YBCO thin films

Leonhardt, S., Albrecht, J., Warthmann, R., Habermeier, H.-U., Kronmüller, H.

{Physica C}, 341-348, pages: 1979-1980, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Channeling of high-energy particles in bent crystals - experiments at the CERN SPS

Baurichter, A., Biino, C., Clement, M., Doble, N., Elsener, K., Fidecaro, G., Freund, A., Gatignon, L., Grafström, P., Gyr, M., Hage-Ali, M., Herr, W., Keppler, P., Kirsebom, K., Klem, J., Major, J., Medenwaldt, R., Mikkelsen, U., Moller, S. P., Siffert, P., Uggerhoj, E., Vilakazi, Z. Z., Weisse, E.

{Nuclear Instruments and Methods in Physics Research B}, 164-165, pages: 27-43, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Magnetoelastic effects in ultrathin epitaxial Ni films: An ab-initio study

Komelj, M., Fähnle, M.

{Journal of Magnetism and Magnetic Materials}, 222, pages: L 245-L 250, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Evidence for near-grain boundary lattice rotations in an Fe(Si) alloy.

Rabkin, E., Semenov, V., Bischoff, E.

{Zeitschrift f\"ur Metallkunde}, 91, pages: 165-170, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Electron focusing in metals and semimetals

Heil, J., Böhm, A., Gröger, A., Primke, M., Wyder, P., Keppler, P., Major, J., Bender, H., Schönherr, E., Wendel, H., Wolf, B., Würz, U., Grill, W., Herrenberger, S., Knauth, S., Lenzner, J.

{Physics Reports}, 323, pages: 387-455, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Analysis of the electronic structure of intermetallic compounds and application to structural defects in B2 phases

Börnsen, N., Meyer, B., Bester, G., Fähnle, M.

{Journal of Alloys and Compounds}, 308, pages: 1-14, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Melt-spun precipitation-hardened Sm2(Co,Cu,Fe,Zr)17 magnets with abnormal temperature dependence of coercivity

Goll, D., Kleinschroth, I., Sigle, W., Kronmüller, H.

{Applied Physics Letters}, 76, pages: 1054-1056, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Hydrogen-induced phase transition of GdZn1-xMgx compounds

Reule, H., Hirscher, M.

{Journal of Alloys and Compounds}, 298, pages: 1-8, 2000 (article)

mms

[BibTex]

[BibTex]


no image
The influence of a finite bandwidth on the Verwey transition in magnetite

Brabers, J. H. V. J., Walz, F., Kronmüller, H.

{Journal of Physics: Condensed Matter}, 12, pages: 5437-5452, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Dynamics of a bouncing ball in human performance

Sternad, D., Duarte, M., Katsumata, H., Schaal, S.

Physical Review E, 63(011902):1-8, 2000, clmc (article)

Abstract
On the basis of a modified bouncing-ball model, we investigated whether human movements utilize principles of dynamic stability in their performance of a similar movement task. Stability analyses of the model provided predictions about conditions indicative of a dynamically stable period-one regime. In a series of experiments, human subjects bounced a ball rhythmically on a racket and displayed these conditions supporting that they attuned to and exploited the dynamic stability properties of the task.

am

link (url) [BibTex]

link (url) [BibTex]


no image
Macro to Nano Tele-Manipulation Towards Nanoelectromec hanical Systems

Sitti, M., Hashimoto, H.

Journal of Robotics and Mechatronics, 12(3):209-217, FUJI TECHNOLOGY PRESS LTD., 2000 (article)

pi

[BibTex]

[BibTex]


no image
Influcence of vortex-vortex interaction on critical currents across low-angle grain boundaries in YBa2Cu3O7-δ

Albrecht, J., Leonhardt, S., Kronmüller, H.

{Physical Review B}, 63, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Symmetrical Tilt Grain boundaries in body-centred cubic transition metals: An ab-initio local-density-functional study

Ochs, T., Beck, O., Elsässer, C., Meyer, B.

{Philosophical Magazine A}, 80, pages: 351-372, 2000 (article)

mms

[BibTex]

[BibTex]


no image
The liquid ferromagnet Co80Pd20 and its critical exponent γ

Bührer, C., Beckmann, M., Fähnle, M., Maier, K.

{Journal of Magnetism and Magnetic Materials}, 212, pages: 211-224, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Irreversible magnetization processes in a soft magnetic platelet

Hertel, R., Kronmüller, H.

{Physica B}, 275, pages: 1-4, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Measurement of the Zener relaxation in high-purity FeCr single crystals

Hirscher, M., Brossmann, U., Henes, R.

{Materials Transactions, JIM}, 41, pages: 82-86, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Ab-initio statistical mechanics for alloy phase diagrams and ordering phenomena including the effect of vacancies

Lechermann, F., Fähnle, M.

{Physical Review B}, 63, 2000 (article)

mms

[BibTex]


no image
Reactions in TiO2/Ti3Al and TiO2/TiAl bilayers: Application of target-factor analysis in auger electron spectroscopy

van Lier, J., Baretzky, B., Zalar, A., Mittemeijer, E. J.

{Surface and Interface Analysis}, 30, pages: 124-129, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Ab-initio treatment of noncollinear spin systems within the atomic-sphere approximation and beyond

Grotheer, O., Ederer, C., Fähnle, M.

{Physical Review B}, 62, pages: 5601-5608, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Is d-Al-Cu-Co a random tiling?

Zeger, G., Plachke, D., Carstanjen, H. D., Trebin, H. R.

{Materials Science and Engineering A}, 294, pages: 291-294, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Nonlinear magnetoelastic coupling coefficients in Fe from an ab-initio calculation

Komelj, M., Fähnle, M.

{Journal of Magnetism and Magnetic Materials}, 220, pages: L 7-L 12, 2000 (article)

mms

[BibTex]

[BibTex]


no image
Current densities in low-angle grain boundaries of YBCO

Albrecht, J., Warthmann, R., Leonhardt, S., Kronmüller, H.

{Physica C}, 341-348, pages: 1459-1460, 2000 (article)

mms

[BibTex]

[BibTex]


no image
The hydrogen desorption kinetics of Pd-coated LaNi5-type films

Cuevas, F., Hirscher, M.

{Journal of Alloys and Compounds}, 313, pages: 269-275, 2000 (article)

mms

[BibTex]

[BibTex]


no image
The structure of the trihydride GdH3

Ellner, M., Reule, H., Mittemeijer, E. J.

{Journal of Alloys and Compounds}, 309, pages: 127-131, 2000 (article)

mms

[BibTex]

[BibTex]